I have to agree with Lars. When I work at a job site and train everyone. I try to get them to make sure that the boxes are loaded in whatever run order they is pleasing to their eye. because of the output from autorep etc.
WCC flow and JAWS flow representations are different animals and that is fine. at the end of the day. when you extract a box you usually want the box and all the children. if you want them in some order then you need to jil them in that order. this is what the joid each job is given , is actually for..
Hope this helps.
Good luck.